Abstract: This article discusses about M. Amin Abdullah’s thought (A professor at StateIslamic University Sunan Kalijaga Yogyakarta) in the field of Islamic Studies. The methodused in this paper is biographical-reflective method because the writer was his student.The focus of the writing is the heredity of the scientific methodology and its implication inthe study of Islam in Indonesia. This article concludes several Islamic scientific hereditiesfrom M Amin Abdullah majoring on the integrative-interconnectivity concept in Islamthat tends to be spaced out, especially in the study of Islamic classics. The other thoughtis about the importance of academic attitude in the development of the future Islamicstudy. In the scientific methodology aspect, he stresses the importance of the renewal inthe Islamic contemporary study to spread the teachings on the earth as the sky heredity,sacral and transcendental, to dive the needs to answer various worldly problems that areempiric and immanent. The implication of Amin Abdullah’s thought gives newinterpretation in the contemporary Islamic scientific study that is more contextual-empirical and different from textual-normative classic Islamic study format.